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1

Utilizing Artificial Neural Networks in MATLAB to Achieve Parts-Per-Billion Mass Measurement Accuracy with a Fourier Transform Ion Cyclotron Resonance Mass Spectrometer

D. Keith Williams Jr., Alexander L. Kovach, David C. Muddiman, Kenneth W. Hanck

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2009

Language:

english

File:

PDF, 266 KB

english, 2009

2

Jürgen H. Gross: Mass spectrometry: a textbook, 3rd ed.

Muddiman, David C.

Journal:

Analytical and Bioanalytical Chemistry

Year:

2018

Language:

english

File:

PDF, 339 KB

english, 2018

3

Application of secondary ion and matrix-assisted laser desorption-ionization time-of-flight mass spectrometry for the quantitative analysis of biological molecules

David C. Muddiman, Arkady I. Gusev, David M. Hercules

Journal:

Mass Spectrometry Reviews

Year:

1995

Language:

english

File:

PDF, 4.08 MB

english, 1995

4

Enzymatic strategies for the characterization of nucleic acids by electrospray ionization mass spectrometry

Allison P. Null, Linda M. Benson, David C. Muddiman

Journal:

Rapid Communications in Mass Spectrometry

Year:

2003

Language:

english

File:

PDF, 396 KB

english, 2003

5

Mass Spectrometry–Based Biomarker Discovery: Toward a Global Proteome Index of Individuality

Hawkridge, Adam M., Muddiman, David C.

Journal:

Annual Review of Analytical Chemistry

Year:

2009

Language:

english

File:

PDF, 873 KB

english, 2009

6

Accurate Identification of Deamidated Peptides in Global Proteomics Using a Quadrupole Orbitrap Mass Spectrometer

Nepomuceno, Angelito I., Gibson, Radiance J., Randall, Shan M., Muddiman, David C.

Journal:

Journal of Proteome Research

Year:

2014

Language:

english

File:

PDF, 507 KB

english, 2014

7

Assessing drug and metabolite detection in liver tissue by UV-MALDI and IR-MALDESI mass spectrometry imaging coupled to FT-ICR MS

Barry, Jeremy A., Groseclose, M. Reid, Robichaud, Guillaume, Castellino, Stephen, Muddiman, David C.

Journal:

International Journal of Mass Spectrometry

Year:

2015

Language:

english

File:

PDF, 2.03 MB

english, 2015

8

Understanding the Role of Proteolytic Digestion on Discovery and Targeted Proteomic Measurements Using Liquid Chromatography Tandem Mass Spectrometry and Design of Experiments

Loziuk, Philip L., Wang, Jack, Li, Quanzi, Sederoff, Ronald R., Chiang, Vincent L., Muddiman, David C.

Journal:

Journal of Proteome Research

Year:

2013

Language:

english

File:

PDF, 2.20 MB

english, 2013

9

Optimizing Mass Spectrometry Analyses: A Tailored Review on the Utility of Design of Experiments

Hecht, Elizabeth S., Oberg, Ann L., Muddiman, David C.

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2016

Language:

english

File:

PDF, 1.41 MB

english, 2016

10

SPIE Proceedings [SPIE BiOS 2000 The International Symposium on Biomedical Optics - San Jose, CA (Saturday 22 January 2000)] Advances in Nucleic Acid and Protein Analyses, Manipulation, and Sequencing - Genotyping complex short tandem repeats using electrospray ionization Fourier transform ion cyclotron resonance multistage mass spectrometry

Hannis, James C., Muddiman, David C., Null, Allison P., Limbach, Patrick A., Owicki, John C., Raghavachari, Ramesh, Tan, Weihong

Year:

2000

Language:

english

File:

PDF, 1.13 MB

english, 2000

11

Improving the Microdialysis Procedure for Electrospray Ionization Mass Spectrometry of Biological Samples

Liu, Chuanliang, Muddiman, David C., Tang, Keqi, Smith, Richard D.

Journal:

Journal of Mass Spectrometry

Year:

1997

Language:

english

File:

PDF, 429 KB

english, 1997

12

Hydropathic influences on the quantification of equine heart cytochromec using relative ion abundance measurements by electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry

Gordon, Eric F., Mansoori, Bashir A., Carroll, Charlotte F., Muddiman, David C.

Journal:

Journal of Mass Spectrometry

Year:

1999

Language:

english

File:

PDF, 236 KB

english, 1999

13

Analysis of Double-stranded Polymerase Chain Reaction Products from the Bacillus cereus Group by Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry

David S. Wunschel, Karen F. Fox, Alvin Fox, James E. Bruce, David C. Muddiman, Richard D. Smith

Journal:

Rapid Communications in Mass Spectrometry

Year:

1996

Language:

english

File:

PDF, 711 KB

english, 1996

14

A Quantitative Study of in vitro Hepatic Metabolism of Tacrolimus (FK506) Using Secondary Ion and Matrix-assisted Laser Desorption/Ionization Mass Spectrometry

Arkady I. Gusev, David C. Muddiman, Andrew Proctor, Andrew G. Sharkey, Prasad N. V. Tata, Raman Venkataramanan, David M. Hercules

Journal:

Rapid Communications in Mass Spectrometry

Year:

1996

Language:

english

File:

PDF, 438 KB

english, 1996

15

Nanoelectrospray mass spectrometry using non-metalized, tapered (50 → 10 μm) fused-silica capillaries

James C. Hannis, David C. Muddiman

Journal:

Rapid Communications in Mass Spectrometry

Year:

1998

Language:

english

File:

PDF, 209 KB

english, 1998

16

Comprehensive nomenclature for the fragment ions produced from collisional activation of peptide nucleic acids

Jason W. Flora, David C. Muddiman

Journal:

Rapid Communications in Mass Spectrometry

Year:

1998

Language:

english

File:

PDF, 75 KB

english, 1998

17

Quantification of singly charged biomolecules by electrospray ionization fourier transform ion cyclotron resonance mass spectrometry utilizing an internal standard

Eric F. Gordon, David C. Muddiman

Journal:

Rapid Communications in Mass Spectrometry

Year:

1999

Language:

english

File:

PDF, 132 KB

english, 1999

18

Characterization of a microdialysis approach to prepare polymerase chain reaction products for electrospray ionization mass spectrometry using on-line ultraviolet absorbance measurements and inductively coupled plasma-atomic emission spectroscopy

James C. Hannis, David C. Muddiman

Journal:

Rapid Communications in Mass Spectrometry

Year:

1999

Language:

english

File:

PDF, 104 KB

english, 1999

19

Accurate characterization of the tyrosine hydroxylase forensic allele 9.3 through development of electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry

James C. Hannis, David C. Muddiman

Journal:

Rapid Communications in Mass Spectrometry

Year:

1999

Language:

english

File:

PDF, 118 KB

english, 1999

20

Precise mass measurement of a double-stranded 500 base-pair (309 kDa) polymerase chain reaction product by negative ion electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry

David C. Muddiman, Allison P. Null, James C. Hannis

Journal:

Rapid Communications in Mass Spectrometry

Year:

1999

Language:

english

File:

PDF, 62 KB

english, 1999

21

Binding site on human immunoglobulin G for the affinity ligand HWRGWV

Haiou Yang, Patrick V. Gurgel, D. Keith Williams Jr, Benjamin G. Bobay, John Cavanagh, David C. Muddiman, Ruben G. Carbonell

Journal:

Journal of Molecular Recognition

Year:

2010

Language:

english

File:

PDF, 865 KB

english, 2010

22

Accessible proteomics space and its implications for peak capacity for zero-, one- and two-dimensional separations coupled with FT-ICR and TOF mass spectrometry

Jennifer L. Frahm, Brian E. Howard, Steffen Heber, David C. Muddiman

Journal:

Journal of Mass Spectrometry

Year:

2006

Language:

english

File:

PDF, 331 KB

english, 2006

23

Simultaneous quantification of cyclosporin A and its major metabolites by time-of-flight secondary-ion mass spectrometry and matrix-assisted laser desorption/ionization mass spectrometry utilizing data analysis techniques: Comparison with high-performance liquid chromatography

David C. Muddiman, Arkady I. Gusev, Karl-Stoppek-Langner, Andrew Proctor, David M. Hercules, Prasad Tata, Raman Venkataramanan, Warren Diven

Journal:

Journal of Mass Spectrometry

Year:

1995

Language:

english

File:

PDF, 1.08 MB

english, 1995

24

Impact of ion cloud densities on the measurement of relative ion abundances in Fourier transform ion cyclotron resonance mass spectrometry: experimental observations of coulombically induced cyclotron radius perturbations and ion cloud dephasing rates

Eric F. Gordon, David C. Muddiman

Journal:

Journal of Mass Spectrometry

Year:

2001

Language:

english

File:

PDF, 207 KB

english, 2001

25

Investigations with O-linked protein glycosylations by matrix-assisted laser desorption/ionization Fourier transform ion cyclotron resonance mass spectrometry

Taufika Islam Williams, Diana A. Saggese, Kristina L. Toups, Jennifer L. Frahm, Hyun Joo An, Bensheng Li, Carlito B. Lebrilla, David C. Muddiman

Journal:

Journal of Mass Spectrometry

Year:

2008

Language:

english

File:

PDF, 256 KB

english, 2008

26

Calibration laws based on multiple linear regression applied to matrix-assisted laser desorption/ionization Fourier transform ion cyclotron resonance mass spectrometry

D. Keith Williams Jr., M. Ashley Chadwick, Taufika Islam Williams, David C. Muddiman

Journal:

Journal of Mass Spectrometry

Year:

2008

Language:

english

File:

PDF, 233 KB

english, 2008

27

Perspectives on the use of electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry for short tandem repeat genotyping in the post-genome era

Allison P. Null, David C. Muddiman

Journal:

Journal of Mass Spectrometry

Year:

2001

Language:

english

File:

PDF, 454 KB

english, 2001

28

Homogeneous Preparations of 3′-Phosphoglycolate-Terminated Oligodeoxynucleotides from Bleomycin-Treated DNA as Verified by Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry

Shuang Chen, James C. Hannis, Jason W. Flora, David C. Muddiman, Kwabena Charles, Yin Yu, Lawrence F. Povirk

Journal:

Analytical Biochemistry

Year:

2001

Language:

english

File:

PDF, 143 KB

english, 2001

29

Utility of accurate monoisotopic mass measurements to confidently identify lambda exonuclease generated single-stranded amplicons containing 7-deaza analogs by electrospray ionization FT-ICR mass spectrometry

Jennifer L Frahm, Christopher J Mason, David C Muddiman

Journal:

International Journal of Mass Spectrometry

Year:

2004

Language:

english

File:

PDF, 159 KB

english, 2004

30

Design, modeling, fabrication, and evaluation of the air amplifier for improved detection of biomolecules by electrospray ionization mass spectrometry

Guillaume Robichaud, R. Brent Dixon, Amarnatha S. Potturi, Dan Cassidy, Jack R. Edwards, Alex Sohn, Thomas A. Dow, David C. Muddiman

Journal:

International Journal of Mass Spectrometry

Year:

2011

Language:

english

File:

PDF, 1.23 MB

english, 2011

31

Foreword

M. Samy El-Shall, David C. Muddiman

Journal:

International Journal of Mass Spectrometry

Year:

2011

Language:

english

File:

PDF, 131 KB

english, 2011

32

Enhancement of ion intensity in time-of-flight secondary-ionization mass spectrometry

Anthony J. Nicola, David C. Muddiman, David M. Hercules

Journal:

Journal of the American Society for Mass Spectrometry

Year:

1996

Language:

english

File:

PDF, 652 KB

english, 1996

33

Charge-state reduction with improved signal intensity of oligonucleotides in electrospray ionization mass spectrometry

David C. Muddiman, Xueheng Cheng, Harold R. Udseth, Richard D. Smith

Journal:

Journal of the American Society for Mass Spectrometry

Year:

1996

Language:

english

File:

PDF, 1.17 MB

english, 1996

34

Determination of the relative energies of activation for the dissociation of aromatic versus aliphatic phosphopeptides by ESI-FTICR-MS and IRMPD

Jason W. Flora, David C. Muddiman

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2004

Language:

english

File:

PDF, 154 KB

english, 2004

35

A method for calculating16o/18o peptide ion ratios for the relative quantification of proteomes

Kenneth L Johnson, David C Muddiman

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2004

Language:

english

File:

PDF, 185 KB

english, 2004

36

Leveling Response Factors in the Electrospray Ionization Process Using a Heated Capillary Interface

Jennifer L. Frahm, David C. Muddiman, Michael J. Burke

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2005

Language:

english

File:

PDF, 307 KB

english, 2005

37

Accurate mass precursor ion data and tandem mass spectrometry identify a class I human leukocyte antigen A*0201-presented peptide originating from vaccinia virus

Kenneth L. Johnson, Inna G. Ovsyannikova, Benjamin J. Madden, Gregory A. Poland, David C. Muddiman

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2005

Language:

english

File:

PDF, 521 KB

english, 2005

38

Sub Parts-Per-Million Mass Measurement Accuracy of Intact Proteins and Product Ions Achieved Using a Dual Electrospray Ionization Quadrupole Fourier Transform Ion Cyclotron Resonance Mass Spectrometer

D. Keith Williams Jr., Adam M. Hawkridge, David C. Muddiman

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2007

Language:

english

File:

PDF, 860 KB

english, 2007

39

Generation and Detection of Multiply-Charged Peptides and Proteins by Matrix-Assisted Laser Desorption Electrospray Ionization (MALDESI) Fourier Transform Ion Cyclotron Resonance Mass Spectrometry

Jason S. Sampson, Adam M. Hawkridge, David C. Muddiman

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2006

Language:

english

File:

PDF, 923 KB

english, 2006

40

Detection of Attomole Amounts of Analyte by Desorption Electrospray Ionization Mass Spectrometry (DESI-MS) Determined Using Fluorescence Spectroscopy

Michael S. Bereman, David C. Muddiman

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2007

Language:

english

File:

PDF, 629 KB

english, 2007

41

Remote Mass Spectrometric Sampling of Electrospray- and Desorption Electrospray-Generated Ions Using an Air Ejector

R. Brent Dixon, Michael S. Bereman, David C. Muddiman, Adam M. Hawkridge

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2007

Language:

english

File:

PDF, 861 KB

english, 2007

42

Probing the Mechanisms of an Air Amplifier Using a LTQ-FT-ICR-MS and Fluorescence Spectroscopy

R. Brent Dixon, David C. Muddiman, Adam M. Hawkridge, A.G. Fedorov

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2007

Language:

english

File:

PDF, 246 KB

english, 2007

43

Construction of a Versatile High Precision Ambient Ionization Source for Direct Analysis and Imaging

Jason S. Sampson, Adam M. Hawkridge, David C. Muddiman

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2008

Language:

english

File:

PDF, 580 KB

english, 2008

44

Generation of Multiply Charged Peptides and Proteins by Radio Frequency Acoustic Desorption and Ionization for Mass Spectrometric Detection

R. Brent Dixon, Jason S. Sampson, David C. Muddiman

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2009

Language:

english

File:

PDF, 308 KB

english, 2009

45

Evaluation of the ALiPHAT Method for PC-IDMS and Correlation of Limits-of-Detection with Nonpolar Surface Area

D. Keith Williams Jr., Daniel L. Comins, Jerry L. Whitten, David C. Muddiman

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2009

Language:

english

File:

PDF, 341 KB

english, 2009

46

Protein expression profiling of CLL B cells using replicate off-line strong cation exchange chromatography and LC–MS/MS

David R. Barnidge, Renee C. Tschumper, Diane F. Jelinek, David C. Muddiman, Neil E. Kay

Journal:

Journal of Chromatography B

Year:

2005

Language:

english

File:

PDF, 206 KB

english, 2005

47

Coupling of a vented column with splitless nanoRPLC-ESI-MS for the improved separation and detection of brain natriuretic peptide-32 and its proteolytic peptides

Genna L. Andrews, Christopher M. Shuford, John C. Burnett Jr., Adam M. Hawkridge, David C. Muddiman

Journal:

Journal of Chromatography B

Year:

2009

Language:

english

File:

PDF, 773 KB

english, 2009

48

Derivatives of pentamidine designed to target the Leishmania lipophosphoglycan

Kari L. Kramp, Kristin DeWitt, Jason W. Flora, David C. Muddiman, Kelli M. Slunt, Todd A. Houston

Journal:

Tetrahedron Letters

Year:

2005

Language:

english

File:

PDF, 134 KB

english, 2005

49

1H NMR and electrospray mass spectrometry of the mono-ionized bis(2,2′-bis(4,5-dimethylimidazole)chloronitrosylruthenium(II) complex ([Ru(NO)Cl(LH2)2]+, LH2=2,2′-bis(4,5-dimethylimidazole)

Thomas W Stringfield, Kasi V Somayajula, David C Muddiman, Jason W Flora, Rex E Shepherd

Journal:

Inorganica Chimica Acta

Year:

2003

Language:

english

File:

PDF, 370 KB

english, 2003

50

Application of sequential paired covariance to liquid chromatography-mass spectrometry data enhancements in both the signal-to-noise ratio and the resolution of analyte peaks in the chromatogram

David C. Muddiman, Baoming M. Huang, Gordon A. Anderson, Alan Rockwood, Steven A. Hofstadler, Mary S. Weir-Lipton, Andrew Proctor, Qinyuan Wu, Richard D. Smith

Journal:

Journal of Chromatography A

Year:

1997

Language:

english

File:

PDF, 506 KB

english, 1997

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